Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRIGQGYDVHKLAYDRDLIIGGVKIPYEKGLLGHSDADVLLHAITDAIIGAIGAGDIGHFFPDTDMVFKDADSAELLAEIWQKVEADGFRLGNLDATIIAEKPKMAPYVEQMKLRIAELLHADSAQVNVKATTTEKLGFTGREEGIASLAVVLLEK
3T80 Chain:B ((4-159))
-MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKL----------ADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMK
General information:
TITO was launched using:
RESULT:
Template:
3T80.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103225 for 1244 contacts (-83.0/contact) +
2D Compatibility (PS) -16190 + (NN) -9052 + (LL) 620
1D Compatibility (HY) -14000 + (ID) 4500
Total energy: -146347.0 ( -117.64 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_3T80.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3T80-query.scw
PDB file :
Tito_Scwrl_3T80.pdb
: