Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALNIEEIIASVKEASVLELNDLVKAIEEEFGVTAAAPVAVAAAGGAAAEQTEFTVELASAG-DSKIKVIKVVREITGLGLKEAKELVDNA----PKALKEGIAKDEAEEIKAKLEEVGANVEVK
3O1F Chain:A ((27-91))
----------------------------------------------------MYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVF-TAEVAETKVA-VNKY-------
General information:
TITO was launched using:
RESULT:
Template:
3O1F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15130 for 356 contacts (-42.5/contact) +
2D Compatibility (PS) -6342 + (NN) -1472 + (LL) 5976
1D Compatibility (HY) -5200 + (ID) 500
Total energy: -22668.0 ( -63.67 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_3O1F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O1F-query.scw
PDB file :
Tito_Scwrl_3O1F.pdb
: