Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VFIHGFQEEVGNLWQETLRHPFVRSLADGTLEKEAFYYYLLQDDYYLSHFEKVIEKSVEQAGTAELAAEMREVQVRLQQSELLMREQFYPRVGLTERDFSERKPAPTAYHYTSHLHRMVDFGSFGVTIAALLPCYALYADIGKMYEGARSSEPFYQELLDSYVDENYQKVVLQQKRLVEQAASMADARELALMKQAFQISVEMEWAFFDMAYKKQNWRGSVNYV
1RTW Chain:A ((1-206))
MFSEELIKENENIWRRFLPHKFLIEMAENTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPDDL-LPFFAESIY-YISKELEMFEKKAQELGISLN----GEIDWRAKSYVNYLLSVASLGSFLEGFTALYCEEKAYYEAWKWVRENLKERSPYQEFINHWSSQEFGEYVKRIEKILNSLAEKHGEFEKERAREVFKEVSKFELIFWDIAY------------
General information:
TITO was launched using:
RESULT:
Template:
1RTW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106910 for 1592 contacts (-67.2/contact) +
2D Compatibility (PS) -22268 + (NN) -11479 + (LL) 1028
1D Compatibility (HY) -11600 + (ID) 2200
Total energy: -153429.0 ( -96.38 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_1RTW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RTW-query.scw
PDB file :
Tito_Scwrl_1RTW.pdb
: