Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LRKSRWLLILLLLIVLVALSACEDSGNGDISGAPAKMEKQHFPPTDTKKGWIELLATDGISSQDNLPCVYEEAESVEKLEVHMKELSTASLTYIYIDGH-IVQMEQGGDELSFQIQLSK------TELRKGIHELAVVQYQENNPETKKVEFLKRANYEVKQIKND |
| 1BKB Chain:A ((75-130)) | ------------------------------------------------------------------------------------IIEKFTAQILSVSGDVIQLMDM-RDYKTIEVPMKYVEEEAKGRLAPGA-EVEVWQILD------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BKB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5005 for 214 contacts (-23.4/contact) +
2D Compatibility (PS) -4290 + (NN) 4515 + (LL) 7784
1D Compatibility (HY) -1600 + (ID) 100
Total energy: 1304.0 ( 6.09 by residue)
QMean score : 0.100
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