Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNLFLTSSFKDVVPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESL----GLLVEELDIATES--L----------GEITTKLRKNDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITSPNIAYIQTMDSTKKAVNLTNYDALNLVDFSTLPHYNNTPFKEITQKIVTEYAGKSQIYPISNHEAIFIRGKEVITKRLS |
| 2V4U Chain:A ((297-409)) | ------------------------KICSIALVGKYTKL---RDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLCKADGILVPGGFGIRGT-----LGKLQAISWARTKKIPFLGV-LGMQLAVIEF---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24884 for 683 contacts (-36.4/contact) +
2D Compatibility (PS) -10451 + (NN) -5373 + (LL) 8120
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -35488.0 ( -51.96 by residue)
QMean score : 0.371
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