Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVFAEYLAEIENPDHRARTQEVLTWVAETFPDLKPEIKWN----TPMFTNN--GTFIIGFSIAKQ------------HMSVSPEVA----GIERFEADIKEAGYSH-TKGIFRITWAKSVDYDLLAKIIKFNIQDKANYTSFWRV
2KFP Chain:A ((3-118))
-------------------RQQFIDYAQK-KYDTKPDHPWEKFPDYAVFRHSDNDKWYALLMDIPAEKIGINGDKRVDVIDLKVQPELVGSLRKK-PG-IY-PAYHMNKEHWITVLLNGPLGAKEIHSLIEDSFQLTRL-------
General information:
TITO was launched using:
RESULT:
Template:
2KFP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37101 for 563 contacts (-65.9/contact) +
2D Compatibility (PS) -9946 + (NN) -1151 + (LL) 2708
1D Compatibility (HY) -4400 + (ID) 500
Total energy: -50390.0 ( -89.50 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_2KFP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KFP-query.scw
PDB file :
Tito_Scwrl_2KFP.pdb
: