Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKLVAWFNGLSKMWKVVVIIGAVFVVIIALTTGEDEGEQTKTKKDSNKVVKTASRPKLSTKDLALIKADLAEFEARELSSEKILKDTIKEESWSDLDFANDNINQMIGTMKRYQQEILSIDAIKRSSEASADTEAFKKIFKEWSEFKIERIQVTIDLLNGKKDSEAVFKKTYPNQIIFKKVRTNKLQTALNNLKVGYELLDSQK |
| 3GME Chain:D ((19-39)) | ----------------------------------GAAGGHTATHHASAAPARPQP------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2160 for 51 contacts (42.4/contact) +
2D Compatibility (PS) -1940 + (NN) 1305 + (LL) 15656
1D Compatibility (HY) 800 + (ID) 200
Total energy: 17781.0 ( 348.65 by residue)
QMean score : 0.694
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