Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKKRLLLASRWIIMLIIYAGLWTYTLFQGDTASWFLTYF-----FSFILLLLFLSSIY----PLKAWKVNRSFVKNTYHDGDLIDMQVSFTRKSRYPVGYLLFQQKIPATFGKVRARQQVVYPLFKKQFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSEKSLTIYPTYFPNVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSVIFYGASHPNFELSLRAAYSFIRKISEENGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFAEIAPVDSLTLQESLDSNLHSGEKILLFTPCMDTMLMQKVTRLTDNKQLQIITFQSEHSKAMDAPAIFLEQASLLSRWERETK |
4AW9 Chain:A ((1-263)) | -------GGKHWVVIVAGSNG-WYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQG-----VPKDYTGEDVTPQNFLAVLRGDAEAVKGIG-SGKVLKSGPQDHVFIYFTDH-GSTGILVFPNEDLHVKDLNETIHYMYKHKMYRKMVFYIE--------------------------------------------------ACESGSMM-----NHLPDNINVYATTAANPR-ESSYACYYD----------EKRSTYLGD---------------WYSVNWMEDSDVEDLT-KETLHKQYHLVKSHTQTSHVMQYG-NKTISTM------KVMQFQGMKR------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133574 for 2255 contacts (-59.2/contact) +
2D Compatibility (PS) -25814 + (NN) 5553 + (LL) 9360
1D Compatibility (HY) -6400 + (ID) 2450
Total energy: -153325.0 ( -67.99 by residue)
QMean score : 0.234
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