Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAESLITKKAIAGGLMELCQHKRFEKISIADITNICGLNRQTFYYHFTDKYDLLTWTYENDFFHCLADGITLGNWDKHVLKMLESIKENADFYKNTVSADASILSFCFSKLTNSLFMDLFEKIDTNATVNEADRVFYAEFFSYGCSGVLIKWITRGFKEAPETIANQLFRLAKDTEFLANSMYREN
3DPJ Chain:B ((9-56))
------TRDQIVAAADELFYRQGFAQTSFVDISAAVGISRGNFYYHFKTKDEIL------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DPJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37739 for 300 contacts (-125.8/contact) +
2D Compatibility (PS) -4934 + (NN) 204 + (LL) 10336
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -36583.0 ( -121.94 by residue)
QMean score : 0.698
(partial model without unconserved sides chains):
PDB file :
Tito_3DPJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DPJ-query.scw
PDB file :
Tito_Scwrl_3DPJ.pdb
: