Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIAIAADHGGFQLKEKIRAHLIESG--YTVKDFGCYSLESVDFPEYAAKVGHFVA-TENSLGVLCCGTGIGMSMAANKIKGVRAAVVSDAFSAMMTRRHNNSNVLCLGERVLGDSLALLLLDTWLVAEFEG-GRHNTRLQKLAELEEREEDK
3K7S Chain:D ((25-169))
--VAIGTDHPAFAIHENLILYVKEAGDEFVPVYCGPKTAESVDYPDFASRVAEMVARKEVEFGVLACGSGIGMSIAANKVPGVRAALCHDHYTAAMSRIHNDANIVCVGERTTGVEVIREIIITFLQTPFSGEERHVRRIEKIRAIE------
General information:
TITO was launched using:
RESULT:
Template:
3K7S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111784 for 1208 contacts (-92.5/contact) +
2D Compatibility (PS) -15343 + (NN) -8633 + (LL) 712
1D Compatibility (HY) -11200 + (ID) 2950
Total energy: -149198.0 ( -123.51 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_3K7S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K7S-query.scw
PDB file :
Tito_Scwrl_3K7S.pdb
: