Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METNQILETIRMIEEEKLDIRTITMGISLLDCMDGDGEAARKKIYQKIVTKARNLVAVGEAIESEFGIPIINKRISVTPIAIIAGSSADTDYVEF-AKTLDAAAKEVGVNFIGGYSALVQKGYTKGDEILIRSIPQALAQTERVCSSVNVGSTRTGINMDAVRQMGEVIKETADLTADTQGLGCAKLVVFANAVEDNPFMAGAFHGVGEADCVINVGVSGPGVVKRAIEKVKGEPFDIVAETVKQTAFK-ITRMGQLVGQVASEKLGVPFGIVDLSLAPTPAIGDSVAHILEEMGLEMVGTH--GTTAALALLNDAVKKGGVMACGHVGGLSGAFIPVSEDAGMIEAVQQGALNLEKLEAMTAICSVGLDMIAVPGDTTA-ETLAAMIADEAAIGVINNKTTAVRVIPASGTKVGDMVEFGGLLGTAPVMPVNGKSSVDFIA--RGGRIPAPIHSFKN---- |
| 1YT3 Chain:A ((1-375)) | MNYQMI--------TTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLGIT------DWSPLKAILRDPSITKFLHAGSEDLEVFLNVFG------------------------ELPQPLIDTQILAAFCGRPMSWG---------FASMVEEYSGVTLDKSE-SRTDWLARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQL----RTRQLACLQLLADWRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSL----------------GLSGSEIRF-HGKTLLALVEKAQTLPEDALPQPM-----LNLMDMPGYRKAFKAIKSLITDVSETHKIS------AELLASRRQINQLLNWHWKLKPQNNLP-------ELISGWRGELMAEALHNLLQEYPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73901 for 2813 contacts (-26.3/contact) +
2D Compatibility (PS) -35860 + (NN) 14359 + (LL) 5680
1D Compatibility (HY) -16400 + (ID) 3100
Total energy: -109222.0 ( -38.83 by residue)
QMean score : 0.070
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