Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKWEEKRDMVKIATWYYHYGWTQAQIAKKIGISRSIISKTLQRAKDLGIVEIFIKDETYYTVDLEQKLEEKFGLEEAIVVATHDMSEEEALNFLAKEAAYTLSKRIAKVKTLGISWGK-TIRKFANEFPFIPHKDLTIIPLIGGMGSSDIDLHSNQICYDLKKKMKCHSKYLYAPALVEDTEMKTDLSKNKYISEVLEEGKTVDMAIVGVS--SPYNHSTMEEIGYINSEDIEELRYKDVVGDINSRFFTADGKEAKTEINTH--VIGLSLEELKNIPTVVALANGLQKKEALVAALNAGLIDVIVITDRMAEYILQKND |
| 4GO1 Chain:A ((15-317)) | ----EEEQVARIAWFYYHDGLTQSEISDRLGLTRLKVSRLLEKGHQSGIIRVQINSRFEGCLEYETQLRRQFSLQHVRVIP--GLADADVGGRLGIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGGVGSYMTGIG--------QLNAACSVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQ--------------GEQLMIGRKGAVGDILGYFFDAKG-DVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGYINALVTDQDTAAAILRS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GO1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131178 for 2354 contacts (-55.7/contact) +
2D Compatibility (PS) -31183 + (NN) -11751 + (LL) 1716
1D Compatibility (HY) -17600 + (ID) 4150
Total energy: -194146.0 ( -82.47 by residue)
QMean score : 0.511
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