Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LANIEYEIIEEIGVLSENARGWRKELNKVSWNGR--PPKYDIRDWSEDHEKMGKGITLTDEEAEVLKKLLD
3ZDS Chain:A ((258-281))
------------------------PLDVVAWHGSNVPYKYDLRRFNTI-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZDS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -448 for 46 contacts (-9.7/contact) +
2D Compatibility (PS) -2044 + (NN) 1224 + (LL) 3924
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -194.0 ( -4.22 by residue)
QMean score : 0.385
(partial model without unconserved sides chains):
PDB file :
Tito_3ZDS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZDS-query.scw
PDB file :
Tito_Scwrl_3ZDS.pdb
: