Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VANKFKTLDKMVYNLLLEKIKNGELVPNEHLAEEK-LAREFGVSRSPLRKAIATLTAQGIVSYHENSGAVLNDCIVDADRYVQLMETIEIFVDAAIAKAAHFGYEMDLEKLYARMQEMERFSYLTDLENYFDAHHRFILCLISFAENPYQVRIVKQIFFQMVHFSDGINMFKSVEIREWTNKKSNQIYELLAEGKIELARKTIKSMFAELTIQAYR |
4WWC Chain:B ((22-77)) | ---------------LKTQIKNGELQPDMPLPSEREYAEQFGISRMTVRQALSNLVNEGLL----------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WWC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22772 for 238 contacts (-95.7/contact) +
2D Compatibility (PS) -5070 + (NN) -3056 + (LL) 15880
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -19968.0 ( -83.90 by residue)
QMean score : 0.764
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