Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEELEVIHKGLANAKNGFKAVPGKLYLTATYIVHKPNDY-FDEEINIPLNRVAKIRGVRTKILGKELLSNILEIDMISGVKYQFVV---NKQKKWLEAVSEVLESRGESEKLG
2DN6 Chain:A ((26-106))
----------------------ERWFVLKPNIISYYVSEDLKDKKGDILLDENCCVESLPDK----DGKKCLFLVKCFDK-TFEISASDKKKKQEWIQAIHSTIHLLK------
General information:
TITO was launched using:
RESULT:
Template:
2DN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44932 for 466 contacts (-96.4/contact) +
2D Compatibility (PS) -8506 + (NN) -4547 + (LL) 2572
1D Compatibility (HY) -4000 + (ID) 450
Total energy: -59863.0 ( -128.46 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_2DN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DN6-query.scw
PDB file :
Tito_Scwrl_2DN6.pdb
: