Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQVAPFYADHVGSILRT---KGIKDAREKFQSGEITALELRKIENTEIKYIVEKQKEVGLKSITDGEFRRAWWHFDFLENLDGVEGY--D----------------------AAGGIQFSKVQTKSHSVKITGPIDF--TTHPFIEDFIFLKEAVGDNHVAKQTIPSPAMLHYRGDIEYQPYL----DDAEKFANDLATAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPADMVITMHICRGNFRSTWIAEGGYGPVAETLFGKL-NIDGFFLEYDNERSGDFAPLKY-VTRPDLKIVLGLITSKTGELEDEAAIKARIEEASEIVPLSQLRLSPQCGFASTEEGN----ILT------EEEQWDKLRYVVRLANDIWGE |
| 1U1J Chain:A ((2-383)) | --------ASHIVGYPRMGPKRELKFALESFWDGKSTAEDLQKVSADLRSSIWKQMSAAGTKFIPSNTFAHYDQVLDTTAMLGAVPPRYGYTGGEIGLDVYFSMARGNASVPAMEMTKWFDTNYHY-IVPELGPEVNFSYASHKAVNEYKEAKA-LG--VDTVPVLVGPVSYLLLSK---AAKGVDKSFELLSLLPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEG--------------QKLQAFTGAYAELESTLS-GLNVLVETYFADIP---------AEAYKTL-TSLKGVTAFGFDLVRGT-KTLDLVKAGFPEG-KYLFAGVVDGRNIWANDFAASLSTLQALEGIVGKDKLVVSTSCSLLHTAVDLINETKLDDEIKSWMAFAAQKVVEVNALAKALAG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64409 for 2763 contacts (-23.3/contact) +
2D Compatibility (PS) -35130 + (NN) -12420 + (LL) 2664
1D Compatibility (HY) -8800 + (ID) 2750
Total energy: -120845.0 ( -43.74 by residue)
QMean score : 0.429
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