Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTKLILLYGGKSAEHEVSLQTAFSVINALDLEKFEAAPIYITNEGEWIQGPLLSGKLDFVEQLRFSATDTIKLATTESEKSEGEAISPAVLEADGQETVVFPLLHGPNGEDGTVQGLFEVLNIPYVGNGVLASSAAMDKIVMKKIFADAGIPQVPAVAVRLIDWKNYQEEMVAEMEEVLTYPVFVKPANLGSSVGISKATNKKELVDAMTEAFLYDRRVVVEQGVV-AREIEMGVLGNDTPVCSVPGEILPEGAV---ATFYDYKAKYQDNNTALIIPTEVDPEILEQMKEYAIQAFLGLDASGLVRADFFLTEDNQLFLNEVNTMPGFTPYSMYPLLWQETGLPYGALIERLVDLAKERHAAKNALKYKLED |
2ZDQ Chain:B ((2-317)) | ---RVLLIAGGVSPEHEVSLLSAEGVLRHI---PFPTDLAVIAQDGRWLLG------------------EKALTALEAKAAPEGEHPFPPPLSWE-RYDVVFPLLHGRFGEDGTVQGFLELLGKPYVGAGVAASALCMDKDLSKRVLAQAGVPVVPWVAVRKGEPPVVPFDPPFFV----------KPANTGSSVGISRVERFQDLEAALALAFRYDEKAVVEKALSPVRELEVGVLGN------VFGEASPVGEVRYEAPFYDYETKYTPGRAELLIPAPLDPGTQETVQELALKAYKVLGVRGMARVDFFLAE-GELYLNELNTIPGFTPTSMYPRLFEAGGVAYPELLRRLVELA---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147040 for 2709 contacts (-54.3/contact) +
2D Compatibility (PS) -33811 + (NN) -14547 + (LL) 4060
1D Compatibility (HY) -23200 + (ID) 7250
Total energy: -221788.0 ( -81.87 by residue)
QMean score : 0.465
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