Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFENYQFPKDFLWGGAIAANQAEGAFKVDGKGISLADLHKYHKGKTNDEISEEQHKGVSLADIKASIEDKINYYPKRHGIDFYHTYPEDLELLAEMGFKTFRTSLDWTRIFPTGEETEPNEAGLKYYDQLIDKIIELGMEPIITILHYETPVEIVLNHGGWHNRKVIDLFEKYGKTVLDRYNKKVKYWIVINQINLIQFE--PFNSTAIPYDAVDDYLSATYQAVHNQFVASAKIYEYGKALNPDLMIGTMLADCTAYPFSCDPDDIVLA-MKRNRMEYFFADVQFQGEYPQYALNYFEENNIHIEITEEDKAILQKNTMDYLALSYYYSQMVDSKRND-LDPASITPNPHLKANPWGWAVDPKGLYNALSQYWDRY-HKPIIIAENGFGMYDKL-ENGEIHDDYRIDYLSAHLKEMKRAMYGGVEIIAYCAWGPIDIVSCSSAQMEKRYGFIYVDLDNEGNGTGKRIKKDSFSWYKKVIESNGEDLEA |
| 4PTX Chain:B ((7-445)) | ------FPEDFIWGAATSSYQIEGAFNEDGKGESIWDRFSHTPGKIENG---------DTGDI---------------ACDHYHLYREDIELMKEIGIRSYRFSTSWPRILPEG-KGRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLP-QALQDKGGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEPWVVAFEGHAFGNHA---PGTKDFKTAL-QVAHHLLLSHGMAVDIFREEDLPGEIGITLNLTPAYPAGDSEKDVKAASLLDDYINAWFLSPVFKGSYPEELHHIYEQNLGAFTTQPGDMDIISRD-IDFLGINYYSRMVVRHKPGDNLFNAEVVKMEDRPSTEMGWEIYPQGLYDILVRVNKEYTDKPLYITENGAAFDDKLTEEGKIHDEKRINYLGDHFKQAYKALKDGVPLRGYYVWSLMDNFEWAYG-YSKRFGLIYVDYEN-GN---RRFLKDSALWYREVIE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PTX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200311 for 3788 contacts (-52.9/contact) +
2D Compatibility (PS) -45430 + (NN) -12984 + (LL) 2760
1D Compatibility (HY) -28400 + (ID) 7400
Total energy: -291765.0 ( -77.02 by residue)
QMean score : 0.512
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