Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLSLEGKTYVVMGVANKRSIAWAIARSLNEAGAKLVFTYADDRAKKSITELVPSLSEVNQNPLILACDVTSEEAITETFETIKDKAGKLSGLAHCIAFANKDFLTGDYLEVDRKSFLQAHEISAYSFTAVARALKHLEMLTEDASLLTLTYLGGERVVENYNIMGVAKASLDASVRYLAMDLGAIGVRVNAISAGPIRTVSARGVSGFSDSISLVEERAPLKRATQAEEVGDTAYYLFSNLSRGVTGEVIHVDSGYHIIGF
3OIF Chain:D ((1-255))
MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR--NDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAAR--PMMTEGGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKG-SDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHI---
General information:
TITO was launched using:
RESULT:
Template:
3OIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -178373 for 2192 contacts (-81.4/contact) +
2D Compatibility (PS) -27321 + (NN) -4628 + (LL) 688
1D Compatibility (HY) -27600 + (ID) 7900
Total energy: -245134.0 ( -111.83 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_3OIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OIF-query.scw
PDB file :
Tito_Scwrl_3OIF.pdb
: