Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKDIDWSNLGFSYIKTDKRY-ISYWKDGEWDEGALTEDNTLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDRNAARIQKSCERLLMPHIPTEKFIDAVMQVVRANEEFVPPYGTGATLYLRPFVIGVGDNIGVHAAPEYIFSVFCSPVGPYFKGGMAPTNFIVS-DFDRAAPNGTGAAKVGGNYAASLLPGQAAKERNFGDCIYLDPATHTKIEEVGSANF---FGITKDDKFVTP-YSPSILPSITKYSLLYLAEHRLGLEAVEGDVYIDKLD------EFKEAGACGTAAVITPIGGIQTKD-DFHVFHSETEVGPVTKRLFDELCGIQFGDVEAPEGWIYKVK |
| 3DTG Chain:B ((31-372)) | -------ANPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATD-AGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTI--ADGQPGEITMALRDTLTGIQRGTFADTHGWMARLN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -156730 for 2652 contacts (-59.1/contact) +
2D Compatibility (PS) -35351 + (NN) -11248 + (LL) 728
1D Compatibility (HY) -26800 + (ID) 7000
Total energy: -236401.0 ( -89.14 by residue)
QMean score : 0.445
|
|
|