Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINQVYRLVSER-QFEEANIEEA-LTEDVVVVRPTYLSICAADQRYYTGSRGKEMLSKKLPMALIHEGVGQVTYDATG--EFEIGTKVVMIPN-T---PTEDDPVIAENYRRSSLFRSSGYDGLMQENVFMRRDRVVRLPENMDMEVAA-YSELISVAFHAITRFKQKANANQSVFGVWGDGNLGFITCLLLKTIYPESKVIIFGKTQYKLDFF-S-FVDEAHLVDEI-------P-EGLVIDNAFECAGGKGSQYAVEQIIDLIKPEGTISLLGVSENPIEFNSRMVLEKGLTVFGSSRSGKEDFQNTVNFLSENERAVEYLSSLIGQRKVVRNLQDIIEAFETDLRNP-FGKTVMEWKV |
| 3S2E Chain:A ((2-339)) | -MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPV---KPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTD---TRPGQWVVISGIGGLGHVAVQYARA-MG-LRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVS----PKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAA-HG----DVKATV-STAK---LDDVNDVFGRLREGKVEGRVVLDFS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185966 for 2778 contacts (-66.9/contact) +
2D Compatibility (PS) -33900 + (NN) -6051 + (LL) 1900
1D Compatibility (HY) -2000 + (ID) 2800
Total energy: -228817.0 ( -82.37 by residue)
QMean score : 0.447
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