Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNLFQDDSLTLHTDLYQLNMMKAYFDDGLHERRSVFEVFFRDMPFDSGFVVFAGLERIIHYMQNLRFTETDIAYLHDE-LGFDGPFLEYLRNFKFKGNILAAKEGEFVFKTEPI----------LQVEASLAEAQLIETALLNIVNFQTL--------------IATKAARIRSVIDDETFAEFGTRRAQEMDAA------I----WGTRAAYIGGCDSTSNVRAGKIFGIPVSGTMAHAMVQAYRD--------ELEAFRSYAKTHF-D-S-IFLVDTYDTLKSGVPNAIKVAKEMGDKINFIGIRLDSGDMAFLSKKARQMLDE-AGFTE--AKIFASSDLDEHTILSLKAQ---KAKIDSWGVGTKLITAYD--------QPALGAVYKMAAIADENDILQDSIKLSSNTEKVSTPGKKKVYRIITNEDGLKAEGDYIALADESLENVDKLTMFHPVHTYIMKTVENFTARELLVPIFQNGELVYDMPSLDEIKAYKEENLALLWDEYKRTVRPEQYPVDLSVKCWKNKMRNIEKVRKSVQLHSPVELDMPF |
| 1VLP Chain:A ((13-412)) | --MSEPVIKSLLDTDMYKITMHAAVFTNFP-DVTVTYKYTNRSSQLTFNKEAINWLKEQFSYLGNLRFTEEEIEYLKQEIPYLPSAYIKYISS----SNYKLHPEEQISFTSEEIEGKPTHYKLKILVSGSWKDTILYEIPLLSLISEAYFKFVDIDWDYENQLEQAEKKAETLFD-NGIRFSEFGTRRRRSLKAQDLIMQGIMKAVNGNPDRNKSLLLGTSNILFAKKYGVKPIGTVAHEWVMGVASISEDYLHANKNAMDCWINTFGAKNAGLALTDTFGTDDF-LKSFRPPYS-----DAYVGVRQDSGDPVEYTKKISHHYHDVLKLPKFSKIICYSDSLNVEKAITYSHAAKENGMLATFGIGTNFTNDFRKKSEPQVKSEPLNIVIKLLEVNGN-----HAIKISDNLGKNMG----------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VLP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96802 for 2788 contacts (-34.7/contact) +
2D Compatibility (PS) -36252 + (NN) -12141 + (LL) 11404
1D Compatibility (HY) -16000 + (ID) 4150
Total energy: -153941.0 ( -55.22 by residue)
QMean score : 0.356
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