Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIRERILADMQVAETIDAHEEIRKSVEFLKAYLKKNTFLKSFVLGISGGQDSTLTGKLAQMAISEMRAETGDDEYRFFAVSLPYGTQLDESDRQDALNFMEPDNRLTVNIKASVDASVAALAEAGVE-LSDFAKGNEKARERMKVQYAIAAMHKGVVVGTDHSAEAVTGFYTKYGDGGTDINPLFRLNKRQGKALLKELGCPEHLYLKKPTADLEDNKPALPDEVALGVTYDQIDDYLEGKEVPADAAAKIENWFIKTEHKRHMAITIFDDFWK |
2PZB Chain:D ((1-272)) | MTLQEQIMKALHVQPVIDPKAEIRKRVDFLKDYVKK-TGAKGFVLGISGGQDSTLAGRLAQLAVEEIRNEGGN--ATFIAVRLPYKV----DDAQLALQFIQADQSVAFDIASTVDAFSNQYENLLDESLTDFNKGNVKARIRMVTQYAIGGQKGLLVIGTDHAAEAVTGFFTKFGDGGADLLPLTGLTKRQGRALLQELGADERLYL---------------------ITYDQLDDYLEGKTVPADVAEKIEKRYTVS-------ASMFDDWWK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2PZB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -61337 for 1928 contacts (-31.8/contact) +
2D Compatibility (PS) -26328 + (NN) -13488 + (LL) 1684
1D Compatibility (HY) -22400 + (ID) 6650
Total energy: -128519.0 ( -66.66 by residue)
QMean score : 0.531
|
|
|