Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELKHVIPNMEKTFGQLEFAGEGKVEQRRI--NGKPTILSRSYNLYSNIQRADDI---VVILPAEAGEKHFEIEQKVKLVNPRITAEGYKIGTRGFTNYVMYADDIVKV
1C4Q Chain:A ((6-56))
-------------TGKVEYTKYNDDDTFTVKVGD-KELATNRANLQSLLLSA-QITGMTVTIKTNA-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1C4Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12586 for 233 contacts (-54.0/contact) +
2D Compatibility (PS) -4826 + (NN) 1312 + (LL) 4292
1D Compatibility (HY) -800 + (ID) 450
Total energy: -13058.0 ( -56.04 by residue)
QMean score : 0.057
(partial model without unconserved sides chains):
PDB file :
Tito_1C4Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C4Q-query.scw
PDB file :
Tito_Scwrl_1C4Q.pdb
: