Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKITTASHGGNYNELAKQHGLTKEMVLDFSANINPLGVPASLKQTITANLD--KLVEYPEPDYLALRARIASFHQLDL-ANVIPGNGATELIFGIAKVT--KAQKVLLLAPTFAEYERAFFDA--EIVYAELTKETNFAA-VEIVLEILERDTEIEAVCLCNPNNPTGQLIAQQEMIKIADLCEKR--NIYLIIDEAFMDFLEENETISMINNLERFPHVAIIRAFTKFFAIPGLRLGYLLTKNDLLAEALMQMREPWSINTFADLAGQMLLEDEAYIRQTFDWINEERDFLYRGLSRFSALTVYRPTVNYIFFHLEKPLDLRKELLLKGIFIRSCANYRGLTENYYRVAVKSRADNSQLLTALEVIFSGN |
| 3EUC Chain:A ((26-366)) | -------------------VPDSHGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRAD--FTLDRGAMLAAMA-EHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESW----MSRLTDFGNLLVMRTVSK-LGLAGIRLGYVAG-DPQWLEQLDKVRPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAANFLLARVPDAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVSTPEENAQFLEAFAASLQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -257159 for 2712 contacts (-94.8/contact) +
2D Compatibility (PS) -36306 + (NN) -19341 + (LL) 1416
1D Compatibility (HY) -20000 + (ID) 4250
Total energy: -335640.0 ( -123.76 by residue)
QMean score : 0.459
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