Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNDKLPASVLSVKVVSNVDNGLFKQLDLKPHQRSLGIITSDCDDVTYTALDEATKAAEVDVVYAKSMYAGAGNASTKFAGEVIGIIAGPSPAEVKSGLAVAVDFIENGASFVSANEDDSVPYFAHCVSRTGTFLSKEANVAEGEAIAYLIAPPLEAMYALDAALKAADVTIGAFYGPPSETNFGGALLTGSQSACKAACDAFKMAVENVAENPLQY
4TLH Chain:C ((1-216))
MKNDLIRPNVLSVKIISNVSPEMAKKLELEPHHKSLGLITADCDDVTYTALDEATKAAEVDVVYARSMYAGAGNASTKLAGEVIGILAGPSPAEVRSGLNATLDFIDSGVGFVSANEDDSICYYAQCVSRTGSYLSKTAGIREGEALAYLVAPPLEAMYALDAALKAADVEMCEFFAPPTETNFAGALLTGSQSACKAACDAFAEAVQSVASNPLG-
General information:
TITO was launched using:
RESULT:
Template:
4TLH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129175 for 1851 contacts (-69.8/contact) +
2D Compatibility (PS) -23634 + (NN) -14691 + (LL) 92
1D Compatibility (HY) -25200 + (ID) 7950
Total energy: -200558.0 ( -108.35 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_4TLH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TLH-query.scw
PDB file :
Tito_Scwrl_4TLH.pdb
: