Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | IANTVILVDQPTLEKMKQTYLPFSNPKLPPGAVFAAKKPGVSITGYKSRKVMFQGVNGEAEAKKWVATLPESKAKAPSVSKGILPANFASKNVIGSDEVGTGDFFGPITVCAAYVDAEMMPLLKELGVKDSKAMKDPEICRIAEKIMPLVPHSVLLCPNPKYNELQKRGMNQGQMKALLHNRAIENVLKKLAPIKPEAILIDQFAE-KNTYYRYLAKEPSIIREDVFFATKAEGLHLSVAAASIIARYKFVQAFDAMSKEVGIPLPKGAGPHVDAVAAEIIERFGL-ETLAKYTKQHFANTEKALKMVKK |
1I39 Chain:A ((1-200)) | -------------------------------------------------------------------------------------------MKAGIDEAGKGCVIGPLVVAGVACSDE--DRLRKLGVKDSKKLSQGRREELAEEIRKICRTEVLKVSPENLDERMA-AKTINEILKECYAEIILRLK-------PEIAYVDSPDVIPERLSRELEEIT---GLRVVAEHKADEKYPLVAAASIIAKVEREREIERLKEKFG---DFGSGYASDPRTREVLKEWIASGRIPSCVRMRWKTVSNLRQK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83415 for 1604 contacts (-52.0/contact) +
2D Compatibility (PS) -21720 + (NN) -8348 + (LL) 7392
1D Compatibility (HY) -4800 + (ID) 2250
Total energy: -113141.0 ( -70.54 by residue)
QMean score : 0.525
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