Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSKQNVPSYGGQAVVEGVMFGGRKQTVTAIRRIDGSLEYFYL---EKNSPVWVMRMKKIPFLRGIVALIESSAIGSKHLAFATDRYDEDPNNPVEEEKIEKKES------KVAMWLG-----------------VAVIGILSFVFAKFVMTLIPVFLAEL--FRPIVPGDTAQVF--------LESLFKLILLLTYIFAVS----QTPIIKRVFQYHGSEHKVINCYEENLPLTVENVQKQSRLHYRCGSSFIL------FTVIVGMFIYLLVPTDPLWLRVVDRILLIPVVLGVAFE--------VLQLTNKCRNIPVLKYLGVPGLWLQLLTTKEPSDDQVEVAIASFNELLRVEKE-GAPID--------VVEPDNLELLE------------------------------------- |
| 4WZI Chain:A ((85-576)) | --VTPFAQVLASLRSVRNNFTIQKLAMETLEELDWALDQLETIQTYRSVSEMASNKFKRMLNRELTHLSEMSRCGNQVSEYISNTFLDKENEDHLAKELEDLNKWGLNIFNVAGYSHNRPLTAIMYAIFQERDLLKTFRISSDTFITYMMTLEDHYHSDVAYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESV-LENHHLAVGFKLLQEEHADIFMNLTKKQRQTLRKMVIDMVLATD------MSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHAADLSNPTKSLELYRQWTDRIMEEFFQQGDKERERGMEISPMADKHTACVEKSQVGFIDYIVHPLWETWADLVQPDAQDILDTLEDNRNWYQAMIP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WZI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122254 for 1921 contacts (-63.6/contact) +
2D Compatibility (PS) -31723 + (NN) 697 + (LL) 668
1D Compatibility (HY) -6000 + (ID) 2750
Total energy: -161362.0 ( -84.00 by residue)
QMean score : 0.098
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