Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDKIFQEKVGPVALTIVPTQKYKSNKIVFKFRAPLERETVTKRALLSILLETNSEKYPTQTDFRKQLANLYGANFYTTTAKKGNEHVLTVIFDMIDGQYVSDGNHILEDAFAFMEQALFRPNVANDAFNEETLTREKENLKSSLEGIYDDKIRFASKRLVEEMFR-DDEFRFGSAGVLEDIDAITAKDLYEYYLQFIAEDTIEIFICGDVTKEEVMPLI-EKMAFSPRPERKGIFYTKEAPKEVRVIHEQQAINQGKLVLGYQTETLFGDDDFVALQLANGLLGGFANSKIFINVREKASLAYYASSRIDSFKGYMIISAGIDEVNYEQALKIIEEQVVAMKQGNFTDDELNQTKEMLINQLLETNDQAQGLIELVYNNVLRD-ANLDLENWIAKIKQATKEEVVAAINKIKPDTIYFLSKGGEELHGKNHI |
| 3D3Y Chain:A ((4-423)) | ----MSVQLVKGVNLHVIPTEKYKTVRLLVRFNTRLNHETITKRTLLSSLMETNSLNYPNQVKLSERLAELYGASFGIGVSKKGNQHWFNISMNIVNDHYLQDS-QVLAEAVDFLKEIIFAPNIQAGQFEAETFQREKENLKAYLESIVEDKQTYASLALQSVYFNQSEDQKIPSFGTVAALAEETAASLAAYYQKMLAEDQVDIFVLGDVNEAELVPLFKQLPFTPREEGKAAIFYNQPIRNVIEERTEREVLAQSKLNLAYNTDIYYGDSYYFALQVFNGIFGGFPHSKLFMNVREKEHLAYYASSSIDTFRGFMTVQTGIDGKNRNQVLRLISTELENIRLGKIRELEIEQTKAMLKNQYILALDNAGAWLEKEYLNELMPQTMLTAEEWIARINAVTIPEIQEVAKRLELQAIFFLEGETE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D3Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148423 for 3385 contacts (-43.8/contact) +
2D Compatibility (PS) -46126 + (NN) -29943 + (LL) 552
1D Compatibility (HY) -38000 + (ID) 7850
Total energy: -269790.0 ( -79.70 by residue)
QMean score : 0.600
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