Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKILFIGDVVGS--------------IGRDAITEYLPQLKKKYKPTITVINGENAASGRG--I----------TEKIYKDFLELGANAVTLGNHTWDNRD--IFEFIDEAKYLVRPANFPDD--T-TPGTGMVFV-----KSNQ----HEIAVINMQGRTFLA--------D--LDDPFRKMDYLIEEAK-KRTNIIFVDFHAETTSEK--------EAMGWYLDGRVTAVVGTHTHVQTSDNRIL----------PEGTAYLTDTGMTGPYDAILGMEKEAVIRRFKT----AL--PTR------FEVPKTGRAVLSGCLITLDESTGKAQKIDRILINEDHPFSFD |
3JYF Chain:A ((9-332)) | LRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSPLGDYMAAKGLKEGDVHPVYKAMNTLNYAVGNLGNHEFNYGLDFLHKALAGAKFPYVNANIIDAKTGKPMFTPYLIQDTRVVDSDGQIHTLRIGYIGFVPPQIMTWDKANLNGKVTVNDITETARKYIPEMRAKGADVVVVVAHSGLSADPYQAMAENSVYYLSQVPG-VDAIMFGHAHAVFPGKDFANIKGADIAKGTLNGVPAVMPGMWGDHLGVVDLVLNNDSGKWQVTQSKAEARPIYDAVAKKSLAAED--GKLVSVLKADHDA--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97832 for 2067 contacts (-47.3/contact) +
2D Compatibility (PS) -26146 + (NN) -9433 + (LL) 1124
1D Compatibility (HY) -8400 + (ID) 2100
Total energy: -142787.0 ( -69.08 by residue)
QMean score : 0.408
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