Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKILFIGDVVGS--------------IGRDAITEYLPQLKKKYKPTITVINGENAASGRG--I----------TEKIYKDFLELGANAVTLGNHTWDNRD--IFEFIDEAKYLVRPANFPDD--T-TPGTGMVFV-----KSNQ----HEIAVINMQGRTFLA--------D--LDDPFRKMDYLIEEAK-KRTNIIFVDFHAETTSEK--------EAMGWYLDGRVTAVVGTHTHVQTSDNRIL----------PEGTAYLTDTGMTGPYDAILGMEKEAVIRRFKT----AL--PTR------FEVPKTGRAVLSGCLITLDESTGKAQKIDRILINEDHPFSFD
3JYF Chain:A ((9-332))LRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSPLGDYMAAKGLKEGDVHPVYKAMNTLNYAVGNLGNHEFNYGLDFLHKALAGAKFPYVNANIIDAKTGKPMFTPYLIQDTRVVDSDGQIHTLRIGYIGFVPPQIMTWDKANLNGKVTVNDITETARKYIPEMRAKGADVVVVVAHSGLSADPYQAMAENSVYYLSQVPG-VDAIMFGHAHAVFPGKDFANIKGADIAKGTLNGVPAVMPGMWGDHLGVVDLVLNNDSGKWQVTQSKAEARPIYDAVAKKSLAAED--GKLVSVLKADHDA---------------------


General information:
TITO was launched using:
RESULT:

Template: 3JYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97832 for 2067 contacts (-47.3/contact) +
2D Compatibility (PS) -26146 + (NN) -9433 + (LL) 1124
1D Compatibility (HY) -8400 + (ID) 2100
Total energy: -142787.0 ( -69.08 by residue)
QMean score : 0.408

(partial model without unconserved sides chains):
PDB file : Tito_3JYF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JYF-query.scw
PDB file : Tito_Scwrl_3JYF.pdb: