Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTLLDKLNEDMKQAMRDKEKEKLSVIRMLKAALQNEAIHQGVKDLTPDDEVTVISRELKQRRDSLAEFDKAGRSDLSDKVRSEIVIVEDYAPKQLTPEELENIVKATIEEVGASSKADFGKVMSAIMPKVKGKADGGAVNQFVKKYLS |
5CWW Chain:C ((1-32)) | --------------LRAREAKRKATLRMLRESLARV--GPNVVRLRDD---------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CWW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5893 for 105 contacts (56.1/contact) +
2D Compatibility (PS) -3724 + (NN) -4520 + (LL) 8612
1D Compatibility (HY) -2000 + (ID) 450
Total energy: 3811.0 ( 36.30 by residue)
QMean score : 0.580
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