Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLEKYVVIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDAFETEIKKLMDSGVRGFNITTPFKERILPFLDELDNLAAASGAVNTVLKKED-KWYGFNTDGKGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTK---DNNNHHAITLEEAEKQLADFTIIIQTTSIGLEASKNKSPISLANVKQGTICSDIIYNPAETAFLKEAKKNGA-ITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQLGGN
1NYT Chain:C ((1-266))METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFINTLNAFFSAGGKGANVTVPFKEEAFARADELTERAALAGAVNTLMRLEDGRLLGDNTDGVGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLS-LDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGH--EFDLIINATSSGISGDIPAIPSSL--IHPGIYCYDMFYQKGKTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPD----VEPVIKQL---


General information:
TITO was launched using:
RESULT:

Template: 1NYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98719 for 2261 contacts (-43.7/contact) +
2D Compatibility (PS) -28037 + (NN) -9542 + (LL) 460
1D Compatibility (HY) -20400 + (ID) 5000
Total energy: -161238.0 ( -71.31 by residue)
QMean score : 0.566

(partial model without unconserved sides chains):
PDB file : Tito_1NYT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NYT-query.scw
PDB file : Tito_Scwrl_1NYT.pdb: