Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENKVQWQVIAGIILALIIAIFAVINVDPVEVNFLFAQAEWPLILIILGSVLCGCLIIFFLNIAKSRGMKKKVKQLTTEKAELERQLAAAKAMKTHSSKVEKRDTENAVDTTK
2L5G Chain:B ((175-201))
------------------------------------------------------------------------NMDRVDREITMVEQQISKLKKKQQQLE---------------
General information:
TITO was launched using:
RESULT:
Template:
2L5G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4022 for 99 contacts (40.6/contact) +
2D Compatibility (PS) -3289 + (NN) -4684 + (LL) 8712
1D Compatibility (HY) -1200 + (ID) 200
Total energy: 3361.0 ( 33.95 by residue)
QMean score : 0.883
(partial model without unconserved sides chains):
PDB file :
Tito_2L5G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L5G-query.scw
PDB file :
Tito_Scwrl_2L5G.pdb
: