Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQVTFKHNPVTLVGTERKVGDKAPNFTVVNRDLEEVTLHDYDGKVRLISVVPSIDTSVCSTQTRKFNEEASNLDNTVVLTISVDLPFAQKKWCAAEGLPNAITLSDHRDLSFGEAYGVIMKE--LR-LLARSVFVVNAVGEIVYTEVVPEGSDHPNYEAAIEAAKKA
3HVX Chain:D ((4-166))
---VHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLSISADLPFAQSRFSGAEGLNNVITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLK--
General information:
TITO was launched using:
RESULT:
Template:
3HVX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80889 for 1274 contacts (-63.5/contact) +
2D Compatibility (PS) -17074 + (NN) -856 + (LL) 588
1D Compatibility (HY) -15200 + (ID) 3700
Total energy: -117131.0 ( -91.94 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_3HVX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HVX-query.scw
PDB file :
Tito_Scwrl_3HVX.pdb
: