Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYFDNSATTKPNAAVLETYTKVASNYFANPSSLHRFGAKSKELLDASRKQIAAMMSALPEEIIFTSGGTEGNNLAIKGLVYSY----QNRG--KHIITSSIEHPSVRVVMEEL-EQEGFTVKYLPVDK-NGVIKLEELKAALTDETILVSIMGVNNEVGSIQPLQEIGEML---------SVLENTFFHVDFVQAIGKIPLTLDANSIDLLTFSGHKFHALRGTGILFKR---KNVHLHPEILGGGQEMGYRSGTENLAGNVALAKALRLTLENEPRKEA-LIEIRDYLLTKIAQMSDMTVHTKQSVAA----PHIVCFSAKGH--RGEILVHALEKEDIYISTTSAC-SSKQKLASSTLKAMGVTDEEATGAVRVSLSYENRLSEAKIFIQKLQEIIENLNKVVK |
| 3A9Y Chain:B ((20-432)) | -VYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQ----TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVL--AQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEGPV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151576 for 3320 contacts (-45.7/contact) +
2D Compatibility (PS) -40670 + (NN) -19545 + (LL) 256
1D Compatibility (HY) -20400 + (ID) 6600
Total energy: -238535.0 ( -71.85 by residue)
QMean score : 0.465
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