Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEGVENKVIVLAGMIGAGKSSYTELIAN-----ELGTK--AFYESIKDNRILEMFYDDPKRWAFALQIYFLNTRFRSIKAALTDQNNVL--DRSIYEDA-LFTQINFEEGNISEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQIDDNPGL-LEYYKHLHSRYDSWFASYDKSETLVINIDEIDINKPNDADYVMQLIHEKLKR
2A30 Chain:D ((23-219))
----RIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNG-KPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLEL--DGIIYLQATPETCLHRIYLRGRNEEQ-----GIPLEYLEKLHYKHESWLL----HRTLKTNFD-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2A30.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83867 for 1244 contacts (-67.4/contact) +
2D Compatibility (PS) -18944 + (NN) -7039 + (LL) 2076
1D Compatibility (HY) -12800 + (ID) 3150
Total energy: -123724.0 ( -99.46 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_2A30.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A30-query.scw
PDB file :
Tito_Scwrl_2A30.pdb
: