Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIENELEHAKKTEKIEFGVNRRLIFSSCLLWMAVGLLLYVVFSHIKGVNGIEEMILLVFIGLCVLRPLFRLINIAPTVELTERGVAYRGDFKSWNEIKKTELKKPAMMLFSQGRLIIMTSINGREEVAWDIVAADVSISLEELEKLIQSMRSTYTDDETIGMEIFVEKK
1HYW Chain:A ((1-58))
---------------------------------------------------------------------------------------------MTRQEELAAARAALHDLMTGKRVATVQKDGR-RVEFT------ATSVSDLKKYIAELEVQTGMTQ-----------
General information:
TITO was launched using:
RESULT:
Template:
1HYW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13257 for 395 contacts (-33.6/contact) +
2D Compatibility (PS) -6715 + (NN) -6090 + (LL) 10640
1D Compatibility (HY) -400 + (ID) 450
Total energy: -16272.0 ( -41.19 by residue)
QMean score : 0.216
(partial model without unconserved sides chains):
PDB file :
Tito_1HYW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYW-query.scw
PDB file :
Tito_Scwrl_1HYW.pdb
: