Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLLVVGSGGRE-HAISKKLLASNNVEKVFCAPGNDGMRLDDI-QLVAISETDKAGLIDFAKKAEIAFVIVGPEVPLLEGVVDALEEAGIKAFGPKANAALIEGSKDFAKQFMEKYAIPTAASRTFTDYAEAKAYLNERGVPIVIKADGLAAGKGVTVALEMEEAVLALKDMMLEEKFGDASLKVVIEDFLAGEEFSLMAFVNGEEVYPMSIAQDHKRAYEGDKGPNTGGMGAYSPVPHISEAVIEEAVQK-----ILLPTAKGMVKEGRYFRGILYAGLILTA-DGPKVIEFNARFGDPETQVVLPRLESDFAALIDALLHNEKPDVR--FKKTGLTLGVVLASAGYPEHYEKGNKLTGLNDI-AEDVAIYHAGTKQDENGDFISDGGRVLLLAKEAETMSDARTLLYPEMQKLDNPNFFYRIDIGTKAE
3MJF Chain:A ((4-426))MNILIIGNGGREHALGWKAAQSPL-ADKIYVAPGNAGTALEPTLENVDIAATDIAGLLAFAQSHDIGLTIVGPEAPLVIGVVDAFRAAGLAIFGPTQAAAQLEGSKAFTKDFLARHNIPSAEYQNFTDVEAALAYVRQKGAPIVIKADGLAAGKGVIVAMTQEEAETAVNDMLAGNAFGDAGHRIVVEEFLDGEEASFIVMVDGENVLPMATSQDHKRVGDGDTGPNTGGMGAYSPAPVVTDDVHQRV-MDQVIWPTVRGMAAEGN----IYTGFLYAGLMISADGQPKVIEFNCRFGDPETQPIMLRMRSDLVELCLAGTQGKLNEKTSDWDER-PSLGVVLAAGGYPADYRQGDVIHGLPQQEVKDGKVFHAGTKLNGNHEVVTNGGRVLCVTALGETVAQAQQYAYQLAEGIQWEGVFCRKDIGYRA-


General information:
TITO was launched using:
RESULT:

Template: 3MJF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -211654 for 3634 contacts (-58.2/contact) +
2D Compatibility (PS) -45249 + (NN) -24555 + (LL) 140
1D Compatibility (HY) -27600 + (ID) 9350
Total energy: -318268.0 ( -87.58 by residue)
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_3MJF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MJF-query.scw
PDB file : Tito_Scwrl_3MJF.pdb: