Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRVKGGTVTRKRRKKIVKLAKGYYGSKHLLFKVANQAVMKSYQYAYRDRRQKKRDFRRLWIARINAAARMQDLSYSKLMHGLKLAGIDINRKMLADLAVNDIASFNTLADSAKKALAK-
1GYZ Chain:A ((59-118))
------------------------------------------------------------WIARINAAVRAYGLNYSTFINGLKKAGIELDRKILADMAVRDPQAFEQVVNKVKEALQVQ
General information:
TITO was launched using:
RESULT:
Template:
1GYZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27055 for 411 contacts (-65.8/contact) +
2D Compatibility (PS) -6062 + (NN) -648 + (LL) 4680
1D Compatibility (HY) -5600 + (ID) 1500
Total energy: -36185.0 ( -88.04 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_1GYZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GYZ-query.scw
PDB file :
Tito_Scwrl_1GYZ.pdb
: