Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKLIDEITKSQLNPDVPNFRPGDTVRVHAKVVEGTRERIQLFEGVVIKRRGAGISETFTVRKISNSVGVERTFPVHTPRIAKLEVIRRGKVRRAKLYYLRNLRGKAARIKEIR
2ZJR Chain:M ((9-109))
RGELLRGIEQDH-TRQLPDFRPGDTVRVDTKVREGNRTRSQAFEGVVIAINGSGSRKSFTVRKISFGEGVERVFPFASPLVNQVTIVERGKVRRAKLYYLRE------------
General information:
TITO was launched using:
RESULT:
Template:
2ZJR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7531 for 630 contacts (-12.0/contact) +
2D Compatibility (PS) -10583 + (NN) -674 + (LL) 1408
1D Compatibility (HY) -8400 + (ID) 2700
Total energy: -28480.0 ( -45.21 by residue)
QMean score : 0.295
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJR-query.scw
PDB file :
Tito_Scwrl_2ZJR.pdb
: