Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNILDSLWNSMALFLSALFFHGMALRSIREKKPAWFQIKFANEFINYALGIYYGLLGVYFIIRGLPGTDSGIYTDMLLNILIVLHLFSSAGPATIALLLIVSGKLFLGDALFANLIYVFLIIGFHFVCMEVAKLRLSSVQKVVLVKLSAIPLMLFYLHQKIHLAYTMNDLPVWILYFLVSFFITFIIVSAAYYIDTSNKLIYDLQQSTILDPLTGLTNFRHFENAFDAAFNHATLKKSNLSVIIIDIDYFKRVNDTYGHLVGNGVLSTFSQMLLKISFPPNTVISRIGGEEFAIILPNINVSETEHLAEKIRRKVEKIDVPIVASGSVITISAGIANYDGRNYPSA--NELLNAADQALYNAKRNGRNQVHIRETEPVI |
| 4H54 Chain:B ((122-293)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYLLTIRSNMDVLTGLPGRRVLDESFDHQLRNA--EPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVY-RYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGHINITVTAGVS----RAFPEEPLDVVIGRADRAMYEGKQTGRNRCMFIDEQNVI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101778 for 1290 contacts (-78.9/contact) +
2D Compatibility (PS) -18699 + (NN) -11971 + (LL) 18740
1D Compatibility (HY) -14400 + (ID) 3100
Total energy: -131208.0 ( -101.71 by residue)
QMean score : 0.477
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