Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVEQLVSNAAILLAGFYIISLVYKEPITKELSTNKKIVIGIWAGLLGFALMVFGIPISNNVIVDLRHIPIIMVGFYGGPIPAIVSAIIISASRFLLSVNSAAIMAAVVMMLIGIITAIFGKRIEKFKIWGVFILNIIACSFVVINLHLILARESHFWINMTVFVLIALVIGAVSAGLMSNMIKSKQLFQKYEQDSTLDYLTKLSNVRQFDEKINHVM-DAGSRQVTLMLIDIDYFKNINDTYGHDAGDAILKQLAIILKRNTSDGSEAFRNGGEEFSIVLLDCPIEKGNFFAEQVRRETEEYDFMIPSGQVVKITISVGVSSSKDGANTSEGL---FKSADEALYKAKLTGRNQVCIADGN |
| 4H54 Chain:B ((129-288)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNMDVLTGLPGRRVLDESFDHQLRNAEPLNLYLMLLDIDRFKLVNDTYGHLIGDVVLRTLATYLASWTRDYETVYRYGGEEFIIIVKAANDEEACRAGVRICQLVDNHAITHSEGH-INITVTAGVSR----AFPEEPLDVVIGRADRAMYEGKQTGRNRCMFID-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77079 for 1199 contacts (-64.3/contact) +
2D Compatibility (PS) -17826 + (NN) -13150 + (LL) 19024
1D Compatibility (HY) -10000 + (ID) 2950
Total energy: -101981.0 ( -85.06 by residue)
QMean score : 0.488
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