Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEERLYELEDKVQDLELEVHDLRDRIQLLEDKPDVRSSLLGHNVWVLIPLVAIISWMVVEIFS
1R48 Chain:A ((5-29))
------NIEQKIDDIDHEIADLQAKRTRLVQ--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1R48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2713 for 92 contacts (29.5/contact) +
2D Compatibility (PS) -2845 + (NN) -2707 + (LL) 3844
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -545.0 ( -5.92 by residue)
QMean score : 0.645
(partial model without unconserved sides chains):
PDB file :
Tito_1R48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R48-query.scw
PDB file :
Tito_Scwrl_1R48.pdb
: