Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGQLFNLPQVEDINYIQTVRAVRKFFKDYLMLRVMAGSRKLPTMTTTYKLTPPNFSNEFHSKVEDAAIHNVDNVHAAQEAVKKYDAILNQLEHIHRKILFEKFIHNLQDITIMLDIPYEERQYKREKRKAVIELATTLGIEVLN
3HUG Chain:A ((27-86))
-------------------------------------------------------------------------------DRLLIADALAQLSAEHRAVIQRSYYRGWSTAQIATDLGIAEGTVKSRLHYAVRALRLTLQ-----
General information:
TITO was launched using:
RESULT:
Template:
3HUG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8902 for 384 contacts (-23.2/contact) +
2D Compatibility (PS) -6465 + (NN) -3930 + (LL) 6528
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -16269.0 ( -42.37 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_3HUG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HUG-query.scw
PDB file :
Tito_Scwrl_3HUG.pdb
: