Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKPKIVILGAGYGGLKTLRKLQQRNLEAEIVLVNKNDYHH-ETTWLHEAAAGTIEPEKLMYPLDKVVNDTKTTFIQD-TVVKINKDEKTVTLDANGDISYDYLLIALGSEAETFGISGLKEYAFTITSVESVKKIRAHIEAQFAKWKTDPRDELLTIIVGGAGFTGIEFLGELTNRIPELVKQYDVPREKVRIYCMEAAPKVLP-QFDAKLVDYGVGVLEDRGVEFHVGKPVKEATADGVKYAESENEVREIKAATIIWAAGVRGNSVIEA-SGFEAGRGRVKVNNNLTVPGNEEILIVGDCSLIINPANDRPFPPTAQIAMQQADVAAVNLAKLVKGETDLQDFVYHEKGTVCSLGDNDAIGVVFGKNLKGYPASVMKKVIDDRALLLIGGSGVLASKGKFKFYK |
| 3KLJ Chain:A ((8-294)) | -KSTKILILGAGPAGFSAAKAALGK--CDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHAD-EIFSLYSYDDALKIKDECK------------NKGKAFIIGGGILGIELAQAIIDS-------------GTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEMG-------------DLIRSSCVITAVGVKPNLDFIKDTEIA-SKRGILVNDHMET-SIKDIYACGDVAEFYG-----KNPGLINIANKQGEVAGLNACGE----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KLJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208819 for 2424 contacts (-86.1/contact) +
2D Compatibility (PS) -30467 + (NN) -11721 + (LL) 6472
1D Compatibility (HY) -10800 + (ID) 3050
Total energy: -258385.0 ( -106.59 by residue)
QMean score : 0.518
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