Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VEAKLQVGVLGFGTVGSGVIHILEEHQEKISQVTGYNISVKKVLVRD---------LEKNRRYETKG-------FELTT-NPSDVLDDPEIAVVVEVMGSITTAREYILQALKAGKHVVTANKDLIALHGDELVAVAQANNCDLFYEASVAGGIPILRTIVNSLAADKIQKVMGIVNGTTNFMLTKMTTEKKSYEDVLAEAQALGFAESDPTNDVDGIDAARKMVIMTRLAFGMNVNLDNVETNGIRGISPEDIEVAYQLGYKIKLVGTAEETNGTVNVNVGPVLLPKAHPLAGVNYENNAVFVTGAAVGETMFYGPGAGELPTATSVVSDLITVAKNSRLGTNGNAFNSYKHETKHTPKEQVFSKYYLRLTMDDKTGTFLKLTQIFAEAGVGFDKILQQPYDDFTATVVIVTHSTSQAQLEQAIARVKDEPEMQMLAKYSVVEG |
| 4XB2 Chain:B ((18-325)) | ---KVNISIFGFGTVGRALAEIIAEK----SRIFGVELNVISITDRSGTIWGDFDLLEAKEVAESTGKLSNIGDYEVYNFSPQELVEEVKPNILVDV-SSWDEAHEMYKVALGEGISVVTSNKPPIANYYDELMNLAKENNAGIFFESTVMAGTPIIGVLRENLLGENIKRIDAVVNASTTFILTKM-SEGKTLDDAIEEAKSLGILEEDPSKDIDGIDAYYKAKILHWVSYGEPP--EEEERLGIREV---------RDARNVRLV--AQVSKGKISVK--PRKLSSDNPLLVEGVQNAAVIRTN-NLGEVILKGPGGGGRVTASGVFTDII---------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -167669 for 2452 contacts (-68.4/contact) +
2D Compatibility (PS) -31615 + (NN) -4963 + (LL) 10040
1D Compatibility (HY) -20800 + (ID) 5150
Total energy: -220157.0 ( -89.79 by residue)
QMean score : 0.449
|
|
|