Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKYFITIMILLFGALSLSACQKDDEVENSSPPKVDLKNEIPIILIHGSGGDTHSLDEMADHLMNKYKSSNEAMSMSINSNGKIAYQGALTKDAKRPIIKFGFDQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPTLRKLVAIGSPFNDLDPDDN-------GDGLA--FNK-LPSN-----------TPQLDYF----IDKKTKIST-DLEVLSIAGALSEDNLTDGIVPTNSSLASRLFMPNNAKVYMEDLQVGESAIHQTLHETS--ESIEKTHWFLEKSSPEKKEIKLISK |
| 1TQH Chain:A ((15-245)) | --------------------------------------GERAVLLLHGFTGNSADVRMLGRFLESK-GYT--CHAPIYKGHGVPPEE---------L--------VHTGPDDWWQDVMNGYEFLKNK-GYEKIAVAGLSLGGVFSLKLGYTV-------PIEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQA------RHDEMINPDSANIIYNEIES-P-VKQIKWY--EQSGHVITLDQEKDQLHEDIYAFLESL------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TQH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31822 for 1662 contacts (-19.1/contact) +
2D Compatibility (PS) -21586 + (NN) -11447 + (LL) 5144
1D Compatibility (HY) -2800 + (ID) 1700
Total energy: -64211.0 ( -38.63 by residue)
QMean score : 0.376
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