Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIKQAADMFGLTVDTLRYYERVGVIPPVHRNESGYRDYKTSDLNWVYLVKNLRNAGLSVESLIEFATLAQLRETQNVEAAQKQVLVDQLKELDEKLAEMKQVRDLLVYKIDSYDSHIAQFKAGELNADNVEKLWERDKF
1Q06 Chain:A ((1-118))
MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNLFNDPQR--HSADVKRRTLEKVAEIERHIEELQSMRDQLLALANACP-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45990 for 687 contacts (-66.9/contact) +
2D Compatibility (PS) -12427 + (NN) -9394 + (LL) 1896
1D Compatibility (HY) -4800 + (ID) 1650
Total energy: -72365.0 ( -105.33 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_1Q06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q06-query.scw
PDB file :
Tito_Scwrl_1Q06.pdb
: