Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFLDKELVNLHGSAKNADEAIVQAGELLVNAGYV-SEQYVEKMVESYHENGAYFVIAPQIAIPHARPTDGVENSAVSLVVLKDGVNFGHAANDPVRLVFGLAATSS--EAHLKVIQKIVSLLSNNDNIEKMIHSEDYQAIGELVEG
2A0J Chain:A ((6-147))
-EILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADVFECLFAREKLGSTGL--GQGVAIPHGRHA-GVKQATGAFIRTREPVGFDAPDGKPVSLIFILLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEVRAILT-
General information:
TITO was launched using:
RESULT:
Template:
2A0J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104423 for 1059 contacts (-98.6/contact) +
2D Compatibility (PS) -15090 + (NN) -6847 + (LL) 356
1D Compatibility (HY) -8800 + (ID) 1350
Total energy: -136154.0 ( -128.57 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_2A0J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A0J-query.scw
PDB file :
Tito_Scwrl_2A0J.pdb
: