Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKEKFDRSKPHVNIGTIGHVDHGKTTLTAAITTVLAKKG-YADAQAYDQIDGAPEERERGITISTAHVEYQTDSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKCDMVDDEELLELVEMEIRDLLTEYEFPGDDIPVIKGSALKALQ----------GEADWEAKIDELMEAVDSYIPTPERDTDKPFMMPVEDVFSITGRGTVATGRVERGQVKVGDEVEVIGIEEESKKVVVTGVEMFRKLLDYAEAGDNIGALLRGVAREDIQRGQVLAKPGSITPHTNFKAETYVLTKEEGGRHTPFFNNYRPQFYFRTTDVTGIVTLPEGTEMVMPGDNIELAVELIAPIAIEDGTKFSIREGGRTVGAGVVSNISK
1HA3 Chain:B ((3-403))---GEFIRTKPHVNVGTIGHVDHGKTTLTAALTFVTAAENPN------------------------AHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENEWVDKIWELLDAIDEYIPTPVRDVDKPFLMPVEDVFTITGRGTVATGRIERGKVKVGDEVEIVGLAPETRKTVVTGVEMHRKTLQEGIAGDNVGVLLRGVSREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVVQLPPGVEMVMPGDNVTFTVELIKPVALEEGLRFAIREGGRTVGAGVVTKI--


General information:
TITO was launched using:
RESULT:

Template: 1HA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -207418 for 3130 contacts (-66.3/contact) +
2D Compatibility (PS) -40534 + (NN) -24012 + (LL) 1848
1D Compatibility (HY) -44400 + (ID) 13850
Total energy: -328366.0 ( -104.91 by residue)
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_1HA3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HA3-query.scw
PDB file : Tito_Scwrl_1HA3.pdb: